Cross validation improvements

YALES2BIO/README.md

@@ -43,10 +43,18 @@ To compile the code, several librairies are needed:
 * parmetis
 * scotch
 
-Then, a Makefile.in is needed. For IRENE, OCCIGEN and JEAN-ZAY platforms, this file is already made. For another platform one has to write it. An example can be found in... 
+Then, a Makefile.in is needed. For IRENE, OCCIGEN and JEAN-ZAY platforms, this file is already made. For another platform one has to write it. An example can be found in machines/occigen-bdw/occigen.Makefile.in.  
+
+In machines/machineName/env, the user needs to change the path of the environment variable YALES2\_HOME. Then, the user can compile the code as it is described in the following.
 
 Compile the code using:
 ```
+source machines/machineName/env
+./compile.sh
+```
+
+Example:
+```
 source machines/occigen-bdw/env
 ./compile.sh
 ```

YALES2BIO/testcase_big/run.sh

+###########################################
+# LAUNCH THE TEST CASE
+###########################################
+if [ $YALES2_HOSTTYPE == 'occigen' ]; then
+   sbatch ${YALES2_HOSTTYPE}_testcase_big.batch
+elif [ $YALES2_HOSTTYPE == 'jeanzay' ]; then
+   sbatch ${YALES2_HOSTTYPE}_testcase_big.batch
+fi
+

YALES2BIO/testcase_small/run.sh

+###########################################
+# LAUNCH THE TEST CASE
+###########################################
+if [ $YALES2_HOSTTYPE == 'occigen' ]; then
+   sbatch ${YALES2_HOSTTYPE}_testcase_small.batch
+elif [ $YALES2_HOSTTYPE == 'jeanzay' ]; then
+   sbatch ${YALES2_HOSTTYPE}_testcase_small.batch
+fi