standardised irene machine

NEMO/machines/irene-amd/batch_small.slurm

-
-#
-#  BENCH launching scripts for Irene
-# Modified for Irene 30/12/2019
-#  To be modified for other machines
-#
-#set -u
-set -x
-#
-cores=2160
-ncore_node=108 # 108 cores used over 128 ( bi-proc 64 cores)
-resolution=1
-dateref=20200210
-timejob=3600
-
-machine=$( hostname | sed -e "s/[0-9]*//g" )
-#
-# number of processes for each executable
-    nproc_exe1=$( echo $cores | bc )
-  (( nproc = $nproc_exe1 ))
-(( nnode = $nproc / $ncore_node ))
-
-nnode=20
-
-[ $nnode -lt 1 ] && nnode=1
-
-nproc5=$( printf "%05d\n" ${nproc_exe1} )
-
-jobname=$HOME/binrun/jobbench
-
-    cat > $jobname << EOF
 #!/bin/bash
-#MSUB -r bench${nproc5}
+#MSUB -r bench
 #MSUB -m work,scratch
-#MSUB -n ${nproc_exe1}
-#MSUB -N ${nnode}
-#MSUB -T $timejob
-#MSUB -e bench_${resolution}_${nproc5}_%I.eo
-#MSUB -o bench_${resolution}_${nproc5}_%I.eo
+#MSUB -n 3960 
+#MSUB -N 31
+#MSUB -T 3600 
+#MSUB -e nemo.err 
+#MSUB -o nemo.out 
 #MSUB -j oe
 #MSUB -x
 #MSUB -q rome
 #MSUB -A tgcc0090
 #==========================================
-set -u
-module load  intel/19.0.5.281
-module load mpi/openmpi/4.0.1
-module load hdf5
-module load  netcdf-c/4.6.0
-module load netcdf-fortran/4.4.4
 #
-set -x
-echo " avant aller dans le repertoire de soumission"
-pwd
-cd \${BRIDGE_MSUB_PWD}/
-pwd
-ls
-#echo $OWN_CCCSCRATCHDIR
-#cd $OWN_CCCSCRATCHDIR
-EXPjob=EXP_${resolution}_${nproc5}_${dateref}
-#
-mkdir -p ${EXPjob}
-cp ${BRIDGE_MSUB_PWD}/tests/BENCH/EXP00/* ${EXPjob}
-ls ${EXPjob}
-
-#rsync -av --exclude="*eo" EXPREF/ \${EXPjob}/
-#rsync -av EXP00/nemo \${EXPjob}/nemo
-cd \${EXPjob}
-ls -la
 
-#jpni=${cores/\**/}
-#jpnj=${cores/?*\*/}
-jpni=45
-jpnj=48
+set -x
+ 
+source env_bench
 
-sed -e "s/jpni *=.*/jpni = \${jpni}/" -e "s/jpnj *=.*/jpnj = \${jpnj}/" namelist_cfg_orca${resolution}_like > namelist_cfg
+resolution=1
 
-time ccc_mprun -n \${BRIDGE_MSUB_NPROC} ./nemo > jobout_${resolution}_${nproc5}_${dateref}
+cp ${NEMO_DIR}/release-4.0/tests/BENCH/EXP00/* .
 
-ls -lrt
-rm -rf *.nc
-cp *  \${BRIDGE_MSUB_PWD}/.
-EOF
-cat $jobname
+jpni=60
+jpnj=66
 
-    ccc_msub $jobname
+sed -e "s/jpni *=.*/jpni = ${jpni}/" -e "s/jpnj *=.*/jpnj = ${jpnj}/" -e "s/nn_itend *=.*/nn_itend = 20000/" -e "s/ln_timing *=.*/ln_timing   = .true./" namelist_cfg_orca${resolution}_like > namelist_cfg
 
+time ccc_mprun -n ${BRIDGE_MSUB_NPROC} ./nemo > job.out