RAMSES: Add large test case

RAMSES/machines/jean-zay-cpu/batch_big.slurm → RAMSES/machines/jean-zay-cpu/batch_large.slurm

@@ -6,7 +6,7 @@
 #SBATCH --time=00:30:00
 #SBATCH --output=ramses3dBig-jean-zay-cpu-%j.out
 #SBATCH --hint=nomultithread
-#SBATCH --qos=qos_cpu-dev
+#SBATCH --qos=qos_cpu-t3
 #SBATCH -A qbg@cpu
 set -x
 

RAMSES/testcase_large/README.md

+Test case presentation
+======================
+
+The small test case of the template application is doing nothing but watching videos on Youtube all day long.
+It uses no DFT method, nor spectral method or anything else. The FFTW is widely not use for this case.
+
+
+Case profile
+------------
+
+A profiling of a small specfem3D test case performed on Occigen on 1 haswell node (64GB) is available in this folder:
+`profile_occigen-hsw.html"
+
+It has been generated using Intel APS (infos: https://software.intel.com/sites/products/snapshots/application-snapshot/) 

RAMSES/testcase_large/prepare.sh

+#!/bin/bash
+echo "************************************************************"
+echo "* Prepare Large case in $bench_dir"
+echo "************************************************************"
+mkdir -p $bench_dir/testcase_large/
+if [[ $HOSTNAME = *"occigen"* ]]; then
+	source ../machines/occigen-bdw/env
+	tar xvf /store/CINES/dci/SHARED/abs/ramses/input.tar -C $bench_dir/testcase_large/.
+	tar xvf /store/CINES/dci/SHARED/abs/ramses/PROD.tar -C $bench_dir/testcase_large/.
+elif [[ $HOSTNAME = *"jean-zay"* ]]; then
+	source ../machines/jean-zay-cpu/env
+	tar xvf $SCRATCH/abs/ramses/input_big.tar -C $bench_dir/testcase_large/.
+	tar xvf $SCRATCH/abs/ramses/PROD_BIG.tar -C $bench_dir/testcase_large/.
+elif [[ $HOSTNAME = *"irene"* ]]; then
+	source ../machines/irene-amd/env
+	tar xvf  $CCCSCRATCHDIR/abs/ramses/input_big.tar -C $bench_dir/testcase_large/.
+	tar xvf  $CCCSCRATCHDIR/abs/ramses/PROD_BIG.tar -C $bench_dir/testcase_large/.
+else
+	echo "Hostname not recognized: abort"
+	exit 1
+fi
+cp $bench_dir/testcase_large/PROD_BIG/cosmo.nml $bench_dir/testcase_large/.
+echo "************************************************************"
+echo "* End Prepare large case "
+echo "************************************************************"

RAMSES/testcase_large/run.sh

+#!/bin/bash
+if [[ $HOSTNAME = *"occigen"* ]]; then
+        cd ../machines/occigen-bdw/
+elif [[ $HOSTNAME = *"jean-zay"* ]]; then
+        cd ../machines/jean-zay-cpu/
+elif [[ $HOSTNAME = *"irene"* ]]; then
+        cd ../machines/irene-amd/
+else
+        echo "Hostname not recognized: abort"
+        exit 1
+fi
+
+source ./env
+if [ -z "$bench_dir" ]; then
+echo "bench_dir missing"
+exit 1
+fi
+
+sbatch batch_large.slurm

RAMSES/testcase_large/validate.sh

+#!/bin/bash
+if [[ $HOSTNAME = *"occigen"* ]]; then
+        source ../machines/occigen-bdw/env
+elif [[ $HOSTNAME = *"jean-zay"* ]]; then
+        source ../machines/jean-zay-cpu/env
+elif [[ $HOSTNAME = *"irene"* ]]; then
+        source ../machines/irene-amd/env
+else
+        echo "Hostname not recognized: abort"
+        exit 1
+fi
+echo "*******************************************************************************************************************"
+echo "* Validate Large case in $bench_dir/testcase_large/ *"
+echo "*******************************************************************************************************************"
+cd $bench_dir/testcase_large
+echo "* ls -1 *.log" && ls -1 *.log
+log_file=$1
+if [ -z "$log_file" ]; then
+        log_file=`ls -thlx run_* | awk -F " " '{ print $1 }'`
+        echo "* No argument provided (ex: ./validate run_%m-%d-%y-%H-%M-%S.log) -> validation of the last run named $log_file"
+else
+	echo "* Validation of the run named $log_file"
+fi
+start_t=`grep startup $log_file | awk '{ print $5 }'`
+end_t=`grep "Total elapsed time:"  $log_file | awk '{ print $4 }'`
+perf=`bc -l <<< $end_t-$start_t`
+
+if [ -z "$perf" ] || [ -z "$end_t" ]
+then
+    echo "* Large bench is not validated"
+else
+    echo "* Large bench is validated:"
+    echo "log file: $log_file"
+    echo "end = $end_t s (total simulation time)"
+    echo "perf = $perf s (total simulation time excluding initialization and i/o)"
+fi
+echo "*******************************************************************************************************************"
+#TODO add a physical validation